biomedical topic
medtype
MedType: Improving Medical Entity Linking with Semantic Type Prediction
scispacy
A full spaCy pipeline and models for scientific/biomedical documents.
awesome-bioie
🧫 A curated list of resources relevant to doing Biomedical Information Extraction (including BioNLP)
SCIRun
SCIRun is a Problem Solving Environment, for modeling, simulation and visualization of scientific problems. This is version 5, the upgraded version of SCIRun v4.
SleepEEGNet
SleepEEGNet: Automated Sleep Stage Scoring with Sequence to Sequence Deep Learning Approach
biograkn
BioGrakn Knowledge Graph
R-Deep-Learning
Workshop (6 hours): Deep learning in R using Keras. Building & training deep nets, image classification, transfer learning, text analysis, visualization
ChineseBLUE
Chinese Biomedical Language Understanding Evaluation benchmark (ChineseBLUE)
bran
Full abstract relation extraction from biological texts with bi-affine relation attention networks
MicrobiomeBestPracticeReview
Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing