pubmed topic

Fetches PubMed article IDs (PMIDs) from email inbox, then crawls PubMed, Google Scholar and Sci-Hub for respective PDF files.

pykong

BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).

ncbi-nlp

I, Librarian - open-source version of a PDF managing SaaS.

mkucej

BioWordVec & BioSentVec: pre-trained embeddings for biomedical words and sentences

ncbi-nlp

NLP framework in python for entity recognition and relationship extraction

Rostlab

EasyPubMed is an extension to make new PubMed easy to use

naivenaive

Findpapers: A tool for helping researchers who are looking for related works

jonatasgrosman

Runs a pubmed query, returns results and allows user to explore high-level structure of returned documents

amcrisan

Tools to scrape publication metadata from pubmed, arxiv, medrxiv and chemrxiv.

jannisborn

A high performance bibliographic information service

kermitt2