protein-embedding topic

List protein-embedding repositories

protein-sequence-embedding-iclr2019

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Source code for "Learning protein sequence embeddings using information from structure" - ICLR 2019

prose

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Multi-task and masked language model-based protein sequence embedding models.

MAPE-PPI

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Code for ICLR 2024 (Spotlight) paper "MAPE-PPI: Towards Effective and Efficient Protein-Protein Interaction Prediction via Microenvironment-Aware Protein Embedding"