mmcif topic

List mmcif repositories

BioDownloader

9
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0
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📦 A Command Line Tool for downloading protein structures, sequences and MSAs

gemmi

198
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38
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macromolecular crystallography library and utilities

p2rank

224
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32
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P2Rank: Protein-ligand binding site prediction tool based on machine learning. Stand-alone command line program / Java library for predicting ligand binding pockets from protein structure.

pdbtbx

43
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12
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A library to open/edit/save (crystallographic) Protein Data Bank (PDB) and mmCIF files in Rust.

pdb-benchmarks

40
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6
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Benchmarking common tasks on proteins in various languages and packages

IHMCIF

20
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3
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📖 mmCIF support for hybrid/integrative models

libcifpp

27
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9
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Library containing code to manipulate mmCIF and PDB files

jupyterlabpymolpysnips

19
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5
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Python snippets for PyMOL to be run in Jupyterlab via the jupyterlab-snippets-multimenus extension.