markov-chain-monte-carlo topic

A batteries-included toolkit for the GPU-accelerated OpenMM molecular simulation engine.

choderalab

MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models. For documentation and downloading the program, please see the home page:

NBISweden

Manifold Markov chain Monte Carlo methods in Python

matt-graham

Implementation of Markov Chain Monte Carlo in Python from scratch

Joseph94m

Sleek implementations of the ZigZag, Boomerang and other assorted piecewise deterministic Markov processes for Markov Chain Monte Carlo including Sticky PDMPs for variable selection

mschauer

Diffusive Nested Sampling

eggplantbren

R package for statistical inference using partially observed Markov processes

kingaa

CmdStanR: the R interface to CmdStan

stan-dev

Python implementation of MATLAB toolbox "mcmcstat"

prmiles

Piecewise Deterministic Sampler library (Bouncy particle sampler, Zig Zag sampler, ...)

alan-turing-institute