eccdna topic

List eccdna repositories

Circle-Map

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A method for circular DNA detection based on probabilistic mapping of ultrashort reads

circdna

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Pipeline for the identification of extrachromosomal circular DNA (ecDNA) from Circle-seq, WGS, and ATAC-seq data that were generated from cancer and other eukaryotic cells.

ECCsplorer

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The ECCsplorer is a bioinformatics pipeline for the automated detection of extrachromosomal circular DNA (eccDNA) from paired-end read data of amplified circular DNA.