biomedical-informatics topic
mne-cpp
MNE-CPP: A Framework for Electrophysiology
pymetamap
Python wraper for MetaMap
DUO
Ontology for consent codes and data use requirements
multi-label-zero-shot
Few- and Zero-shot Multi-Label Learning for Structured Label Spaces
MetaSRA-pipeline
MetaSRA: normalized sample-specific metadata for the Sequence Read Archive
schematic
Package for biomedical data model and metadata ingress management
clinical_informatics_umls
An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being a free UMLS license holder. This repo will subset 2021AB UMLS...
KG_RAG
Empower Large Language Models (LLM) using Knowledge Graph based Retrieval-Augmented Generation (KG-RAG) for knowledge intensive tasks
CANDO
Computational Analysis of Novel Drug Opportunities
MedDistant19
MedDistant19: Towards an Accurate Benchmark for Broad-Coverage Biomedical Relation Extraction (COLING 2022)