Jean-Yves Tinevez

Results 14 issues of Jean-Yves Tinevez

The library on which we depend to paint the TrackScheme windows is end-of-life: https://github.com/jgraph/jgraphx This is not necessarily a problem if there are no security issues or if we are...

Sometimes it fails on noisy images with a strong background. Can we make it more robust against these case? Or make it able to report it failed?

enhancement
for-hire

If I track a 250MB image (one coming from the ISBI SPT challenge, VIRUS snr 7 density high) I see it at the end of the tracking. I document here...

bug

New advanced Kalman tracker to allow to take into account features penalties and split/merge the trajectory segments.

Package for Hough circle transform in ops, based on Bresenham circle iteration. To be merged after discussion with the work of @gselzer on https://github.com/imagej/imagej-ops/blob/54ba352f1f28ccf912806d8781529c1fb15f03a0/src/main/java/net/imagej/ops/segment/hough/CircleTransform.java Example (requires imglib2-ij and imagej-ops...) ```...

to do

The CSV export methods in the table classes only exports what is directly shown in the tables, and use the GUI classes of Java. This causes errors when used in...

https://forum.image.sc/t/error-headlessexception-when-trying-to-save-csv-file-of-tracking-data-from-trackmate-when-running-headlessly/94304/3

## Support 3D segmentation by adding spots with triangular meshes. ## A 3D viewer for TrackMate based on the BVV. #280 ![image](https://github.com/trackmate-sc/TrackMate/assets/3583203/a91aa1f3-956d-4a9c-8581-677526bdf63c) ## A tool to configure a sub-selection of...

This PR is a prototype for a version of LabKit that ships configurable keymaps. Only a subset of the actions in LabKit have configurable shortcuts for now. The configurability was...

With the recent update in `mobie-io` and `pom-sciajava` `37.0.0`, Mastodon lost its ability to open remote images stored on a S3 storage, using Zarr file format. Let's put it back...

enhancement