Tim Treis
Tim Treis
@Sonja-Stockhaus @LucaMarconato I fixed some things that were causing warnings in other notebooks. Apparently, this fixed it.
@Sonja-Stockhaus I modified your notebook slightly to have less redundant code. For testing I reduced the number of points. Will rerun over-night with enough `Points` to see the effect. However,...
Not yet. On the one hand is datashader not faster for points, so that's weird. And then I wanted to first release sonjas feature branch so that the watermark has...
Hey @harrymueller, thank you for the report and fix suggestion! We're currently in the process of migrating the Squidpy-internal plotting functions to instead rely on [`spatialdata-plot`](https://github.com/scverse/spatialdata-plot) so we will stop...
> One assumption here is that the Zarr array chunks will not be reshaped frequently. Could you elaborate on that?
Hey @ConstensouxAlexis, the picture looks correct though, no? Given that your plot background is white, they should show up as white. Or what was the result you expected?
@lisch7, does @degrainger s comment solve your question?
@clwgg could you verify that Sonja's branch fixes the issue for you as well? :) Thanks!
Hey @LLehner > How should multiple slides be dealt with? All these methods should work with multiple slides, but i'm still not sure how the adjacency matrix changes when you...
Basically yeah, the core idea is that `spatialdata-plot` is akin to `matplotlib`, basically just delivering the base plotting capability. And anything fancy is then a wrapper around that. So, as...