Thomas Vognbjerg Sydenham issues

Results 4 issues of


                                            Thomas Vognbjerg Sydenham

Save image as svg/png with no background

Hi, Bandage 0.8.1. GUI on windows 10. When I save a graph image as .svg or .png, it is created with a white background. I can remove the background layer...

deepbinner realtime does not quit after sleep 5

Hi, I hope this has an obvious answer. I cannot figure out how to get deepbinner to exit its "waiting for new files" mode to continue a bash script/job that...

error: Could not realloc buffers, the sequence too long:

Hi, trying to use samtools stats to get the error rate of a bacterial genome assembly (compared to a reference). Inspired by https://github.com/nataliering/Resolving-the-complex-Bordetella-pertussis-genome-using-barcoded-nanopore-sequencing/blob/master/raw_error The reference genome is two contigs (aprox...

duplicate in master db

Hi, \>IS1004_IS200/IS605_IS200 and the associated sequence is duplicate in https://raw.githubusercontent.com/thanhleviet/ISfinder-sequences/master/IS.fna lines 13 and 15 (and 14 and 16 respectively) Probably the same for the fsa and csv versions? ``` >IS1004_IS200/IS605_IS200...