tf1993614

Hi, I am wondering which assay used by plot_genes_in_pseudotime function in default? Raw counts or normalized counts? I checked it help page but didn't find the answer. Looking forward to...

logNormcounts() function doesn't work for my singlecellExperiment object

11

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extractSequence function doesn't work

1

Hi, I met one problem with the extractSequence function. My transcript-level counts were produced from salmon. According to the user guide > If you are “only” analyzing known isoforms from...