termithorbor

I tried it but it works not as good as I expected it So after running cutadapt my first primer pair is still found in some places: Before:  After:...

I tryed it and now make works but when I want to run dashing my system says that it can not find the command dashing. However I am in the...

I had the error as well. Reinstalling Masurca with Conda worked for me. https://anaconda.org/bioconda/masurca

The goal is just to get rid of taxa which might be artefacts as mentioned in the paper. So is such a filtering approach reasonable or is it not needed...

Did you use Conda for installing Unicycler? if so you can run conda update spades or conda install spades=3.15.5