teepean

Compiling bowtie2 on Windows: cannot open gzipped files

1

Hello! I have had a really mysterious problem when trying to compile my own bowtie2 with MSYS2/Mingw-w64: compiled versions of bowtie2 can't open any gzipped files! For example single-ended: `bowtie2...

Plugin for Yle Areena has changed

1

The old plugin for Yle Areena has been deprecated as it is not supported any longer. Could you please update the plugin to support a new one, thanks! Here's the...

Export FASTA using the command line version

1

Would it be possible to export FASTA from the command line version? Web based version supports exporting a FASTA but having a command line version to do that as well...

Areena could use updating

2

Yle-dl is at version 2.9.0 at the moment.

Program not logging when run at startup

1

**Describe the bug** I would like the program to run at all times so tried both HKLM and HKCU registry keys. The program starts and task manager shows it is...

Segfault with cel-files not succesful.

1

Hello, I tried a simple test with a cel but it segfaults. Am I doing it wrong or what might cause the issue? bcftools +affy2vcf -v --csv GenomeWideSNP_6.na35.annot.csv --fasta-ref human_g1k_v37.fasta...

Small change to enable compiling Fastahack with Cygwin.

Add T2T positions?

4

Hello! Would it be possible to add T2T to Yleaf positions and support for T2T-CHM13v2.0 reference? Thanks!