Tauana J. Cunha

icon indicating a website link https://tauanajc.github.io/ icon indicating an email [email protected]

icon company Field Museum icon location Chicago icon location Postdoctoral Fellow at the Field Museum of Natural History. Certified Instructor for The Carpentries.

Results 3 issues of Tauana J. Cunha

Dedropy mistakenly looking for DNA alphabet in ProteinCharacterMatrix.get

1 comment

When using: dendropy.**Protein**CharacterMatrix.get(path="file.nex", schema="nexus") Dendrophy returns an error about DNA alphabet: Error parsing data source 'file.nex' on line 7 at column 14: Unrecognized character state symbol for state alphabet **'DNA'...

Extract clade from beast object

I read all the vignettes and know about the viewClade function, but I was looking for something like extract.clade from ape to completely separate a clade, and not only the...

quick-run issue: super reads file not found or size zero

6 comment

Hi there! I recently installed v4.0.3 and tried running the new quick run of MaSuRCA. It seemed fine until it failed with the following error: ``` super reads file not...