tanpham15

Hi, I got the same error, even I tried the newest version (by conda) ``` Variable OMP_NUM_THREADS has been set to 2 diamond v2.1.9.163 (C) Max Planck Society for the...

I found the issue: using "Arthropoda.fa.gz" Protein need to be unzipped before running. Please close the question. Thank you very much

Hi Kathrarina, Here is my error: `Failed to execute: /opt/Augustus/bin//etraining --species=Sp_4 --AUGUSTUS_CONFIG_PATH=/data/home/mpx586/.augustus /data/scratch/mpx586/Batesia_hypochlora/RNA/braker3/new_braker2/train.f.gb 1> /data/scratch/mpx586/Batesia_hypochlora/RNA/braker3/new_braker2/gbFilterEtraining.stdout 2>/data/scratch/mpx586/Batesia_hypochlora/RNA/braker3/new_braker2/errors/gbFilterEtraining.stderr` In the /braker/errors, they reported some errors: - In file "samtools.sort.rna_trimmed_minimap2.stderr", `[bam_sort_core] merging from...

> What does it say in /data/scratch/mpx586/Batesia_hypochlora/RNA/braker3/new_braker2/gbFilterEtraining.stdout and /data/scratch/mpx586/Batesia_hypochlora/RNA/braker3/new_braker2/errors/gbFilterEtraining.stderr ? Hi, When I run both my data and an example of "test3.sh" with braker3_latest.sif, gbFilterEtraining.stderr said: `Could not locate command...

I am done. 30:45:22 of running, here is the resource I used: 4 nodes * 3Gb/node on HPC, (I got the error when I request 6 nodes).