tanhevg

Hey, sorry, I have moved on to something else at the moment. Will keep this in mind next time I need to build a large database for HHBlits search.

The issue here is that BioJulia handles gap open and extend penalties a bit differently from BioPython. A gap of size `k` costs `gap_open + k * gap_extend` in BioJulia....

From what I've seen in the literature, original papers from the 80's and 90's mostly use the `gap_open + k * gap_extend` notation. One could argue that `gap_open + (k...

Need to clean up README.md from the folders with training and test .bson files; READMEs upset the BSON parser.