Bogdan Tanasa

Hi Nicolas, I have rebuild a singularity container by using the following docker image : `singularity build hicpro3.simg docker://nservant/hicpro:3.0.0` However, when I do exec the simg, I am getting the...

Merci Nicolas. I can see that the version 3.1 is described on : https://github.com/nservant/HiC-Pro if the docker container for the version 3.1 is available on docker.hub, please let me know...

wonderful, thanks Nicolas.

Hi Nicolas. Thank you for our previous conversations. I have not found the Docker/Singularity 3.1.0 on Docker Hub : where shall I look for it ? Thank you ! ~...

thanks a lot for your time, comments and suggestions :)

I am getting the same error. Is there any solution that you would recommend ? Thanks so much ! svaba refilter -i $file -b EA5040566.EA5040598.svaba.contigs.bam -g hg38.fa Input bps file:...

Hi Huan. I have a similar question to yours. Namely how can I transform the traditional type of input into scarHD (A) (generated by sequenza): _chromosome position base.ref depth.normal depth.tumor...