tamuanand

I think this still uses Trim Galore under the hood > the nf-core/methylseq pipeline has an EM-seq switch which should work equally:

Hi @toniher @lucacozzuto I was wondering if you could help here. Thanks in advance

Thanks a lot Osamu. I would like to wait for your new/modified version of spaln.

Hi @bgruening - sure we can remove htop. But other tools are required.

Hi @bgruening The build fails with this message ``` [Aug 25 09:11:16] SOUT └─ ucsc-bedgraphtobigwig 447** does not exist (perhaps a typo or a missing channel). [Aug 25 09:11:16] ERRO...

Hi @bgruening In PR 2727, I could get it to work with version 377. Yes, for different purpose, I need wigToBigWig,-and I am working on it Thanks.

Hi @martenson Sorry I missed it - I have corrected it and submitted https://github.com/BioContainers/multi-package-containers/pull/2270 Thanks

Hi @althonos Thanks for responding to my queries. I have a follow up query: You suggest to use gecco as a complement to antiSMASH >gecco being better at identifying novel...

Hi @althonos I was wondering if you could elaborate on the above. Thanks

Hi @althonos AntiSMASH 6 is now available - if you are planning to use antiSMASH I would recommend using antiSMASH 6.0