Sander W. van der Laan

Results 32 comments of Sander W. van der Laan

Thanks for the compliment 👨🏻‍💻😁 That would be great. Please go ahead... Do you have a timeline? It would be great if you could add ... I might simply switch...

Any progress on this?

I would argue that `MAF` and `INFO` are available for each GWAS. My idea would be to have stratified QQ plots including lambda's per bin (and potentially counts of variants),...

Yes that would be a great idea. I would go for two flags `maf` and `info`. So users would have to run it twice. And it would impede in the...

Yes, this is a good start. Very good. Only thing lacking is the lambda per bin. That way you can assess whether there is inflation originating from that bin or...

Hi, Great question. I have a related one. See below my code: ``` Pmap.temp

Yes, excellent suggestion. I thought of that option too. Thanks!

But are you working on a way such that we can just name the file the way we want to? So where `memo = "myfavoriteplot.jpg"` and the file would be...

I dove into the R code, but it's hard to find what I am looking for. I tested this also with a random range within the dummy-dataset provided with the...

Ooh good point. So here are the data. And here is a summary of the p-values for each trait using `r` `summary()`. ``` Min. 1st Qu. Median Mean 3rd Qu....