Scissor

Scissor copied to clipboard

Run error in our own Seurat object

8

When I run in our own Seurat object, it occurs error ``` infos1

l-magnificence

Hello, I have the following problem when dealing with my data: 1. First of all, when I use all the data, my single cell data is 150,000, and I get...

chenx9

Cholmod error 'problem too large' at file ../Core/cholmod_dense.c, line 102

2

This looks like a recurrent problem where sparse matrices cannot be handled. Any suggestions?

Shubhra1994

I have not been able to successfully implement a cut-off threshold while calling Scissor. For example, if alpha = 0.05 leads to 40% of cells being selected by Scissor and...

kpruss

Hello, I'm testing Scissor with several continuous dependent variables. info

kpruss

Error for big dataset

9

Hi! Thank you for the nice tools. I was using scissor for a big dataset, it seems the "as.matrix" in "network

xiaoyaohao

Error in asMethod(object) : Cholmod error 'out of memory' at file ../Core/cholmod_memory.c, line 146

4

Hello developers, I got the following prompt when running the code:infos1

snowluckyheart

my scRNA is not tumor data,there is no bulk data, I see that your demo that need scRNA data, bulk data and phenotype , so what should i do if...

liusihaha

ERROR RUN Scissor

3

When I run in our own data, it occurs error!!!!!!    I want to know how to solve this error

1378989

Error in normalize.quantiles(dataset0) : ERROR; return code from pthread_create() is 22

17

Got a error when running your tutorial using your data: Error in normalize.quantiles(dataset0) : ERROR; return code from pthread_create() is 22 I am using R 4.1.1 Can you help to...

harrywo-zz