Katy Scott

Handling added for uppercase and lowercase .dcm or .Dcm files in crawl function. Fixed database_list to database_dict conversion to merge dictionaries with the same key (patient ID) so all information...

Crawl portion of autopipeline misses CT and RTSTRUCT files

2

Running ```autopipeline /Users/katyscott/Documents/SARC021/images/ /Users/katyscott/Documents/SARC021/med-imageout/ --n_jobs 1 --update --overwrite``` doesn't find all of the CT and RTSTRUCT files in the images directory. My images directory contains four directories total - one...

Crawl misses files if multiple studies present for single patient directory

1

 If patient directory contains multiple studies and an RTSTRUCT references a CT in a different study, crawl function outputs do not show this association (i.e. in the edges.csv)