stnava

thank you, both of these observations are helpful perhaps worth adding to `antsRegistrationSyN{Quick}.sh` as an option ... does seem logical to have this available. but i am beginning to wonder...

maybe --- if it is clear to you, do you want to make a pull request / some initial attempt at making such a script?

there are other issues here - affine gradient step and other things impact this. anyway, the Mattes metric ( by definition probabilistic ) is the culprit. if you use mean...

here is what I recommended to a colleague for real processing scenarios: * run the flair through antspynet.sysu_media_wmh_segmentation * get the T1 from the same session * register the T1...

Can you provide a picture? On Mon, Apr 26, 2021 at 6:53 PM Daniel Brennan ***@***.***> wrote: > Good evening ANTs experts, > > I am running into a consistent...

This type of problem is present in lots of Different parts of the brain. Would be very worthwhile to arrive at a general solution. Set of brain extractions that properly...

I think this is a bug - I also expect something related in the recent padding functions that were added - noting different behavior from R - should confirm/address this...

the index representation does not support float as it is by definition integer. there is something incorrect about your usage if you think that you need this.

again, I think you have a misunderstanding. the *definition* is integer type - not talking code here, this is the math. indices are discrete entities. the link you sent shows...

You are confusing indices and continuous indices On Fri, Mar 18, 2022 at 9:26 AM Andrew Berger ***@***.***> wrote: > The map from physical space to index space and it's...