stnava
in ANTsR and ANTsRCore, many examples show useful applications or beginnings of applications. however, some of these have become out of date, are inconsistent with current package organization or other...
@jeffduda is your slice timing correction from ImageMath in ANTsR or ANTsRCore? if not, would it be possible to add? not urgent but i've heard of a few cases where...
@ntustison , @bkandel , @dorianps, @jeffduda , @cookpa , @armaneshaghi, @muschellij2 hoping to work toward a CRAN submission for ANTsR - some updates on this topic: i ran rd2roxygen and...
**goal** Provide a generally agreed upon and easily accessible set of registration parameters that support reproducible results with multi-threading **proposed solution** 0. set random seed to 1 (though still allow...
**Is your feature request related to a problem? Please describe.** @ntustison @dorianps and i have repeatedly encountered barriers to doing basic processing of DWI to DTI. we've encountered limitations of...
The question: what is a good / correct approach to unwarping the LR and RL BOLD data to match the T1 from HCP data? Background: i am aware of this...
building on these notes: https://github.com/stnava/ANTs/wiki/Reconstruct-DTI-from-DWI-using-mrtrix does anyone know how to do motion correction and subsequent dti calculation / fiber tracking based only on ants / mrtrix ?
I shall go back again to the bleak shore And build a little shanty on the sand In such a way that the extremest band Of brittle seaweed will escape...
the script maps two images together through a midpoint space, not a midpoint image this defines an unbiased registration geometry but not an average image. 2 different concepts. ``` unbiased_pairwise_registration.sh...
maybe we could use the data from the MALF example to illustrate how to tune parameters. ie set up a search over metric, transform, etc and report overlap values (not...