Carsten L

Hi @mehnaz1985, Since this issue has already been discussed and there has been no recent activity, we will close this issue in 2 weeks (Monday 14th of August). If your...

Hi @baumgach , Since this issue has already been discussed and there has been no recent activity, we will close this issue in 2 weeks (Monday 14th of August). If...

Hi @mehnaz1985 and @hoangnambui2301, Since this issue has already been discussed and there has been no recent activity, we will close this issue in 2 weeks (Monday 14th of August)....

Hi @wjcheon, Since this issue has already been discussed and there has been no recent activity, we will close this issue in 2 weeks (Monday 14th of August). If your...

Hi @RaylinLee, Are you referring to the following script? [nnUNet](https://github.com/MIC-DKFZ/nnUNet/tree/master)/[nnunetv2](https://github.com/MIC-DKFZ/nnUNet/tree/master/nnunetv2)/[dataset_conversion](https://github.com/MIC-DKFZ/nnUNet/tree/master/nnunetv2/dataset_conversion)/Dataset137_BraTS21.py Could you please provide me with the entire error message, including the trace? Best regards, Carsten

Hi @RaylinLee, It also seems to me that the folder in which BraTS is located is not changed in your code. (Currently it is set to the location where Fabian...

Hi @RaylinLee, you need to ensure that you have exported the variables nnUNet_raw, nnUNet_preprocess and nnUNet_results. As Fabian already pointed out, they appear as None when nnU-Net tries to read...

Hi @RaylinLee, sorry for the delay. In case you have not got nnU-Net running until now: It seems to me that the paths are now set correctly. However, I am...

Hi @imruljubair, `resampling_fn_probabilities` is used to resize logits or class probabilities to the desired shape. A typical usecase of this function can be seen in the [inference code](https://github.com/MIC-DKFZ/nnUNet/blob/master/nnunetv2/inference/export_prediction.py#L15). Best regards,...

Hi @hyunjung00, I am not sure whether I understand you correctly. Generally, nnU-Net creates plans with specific patch sizes for training and specific resolutions for training. During preprocessing, the images...