Package version conflict

[mehnaz1985]

I am facing version conflict now. pkg_resources.ContextualVersionConflict: (numpy 1.19.5 (/home/mehnaz/environments/nnUnet_ve/lib/python3.6/site-packages), Requirement.parse('numpy>=1.20.0'), {'imageio'}) I have tried to upgrade numpy but cant. it showing the following message:

imageio 2.16.0 requires numpy>=1.20.0, but you have numpy 1.19.5 which is incompatible. Successfully installed numpy-1.19.5

Could you please upload a requirements.txt file that list the exact versions of different packages? Thanks.

Please read the following resources before posting issues:

Common questions: https://github.com/MIC-DKFZ/nnUNet/blob/master/documentation/common_questions.md

Common Problems and their solutions: https://github.com/MIC-DKFZ/nnUNet/blob/master/documentation/common_problems_and_solutions.md

Expected epoch times and tips on how to identify bottlenecks: https://github.com/MIC-DKFZ/nnUNet/blob/master/documentation/expected_epoch_times.md

[FabianIsensee]

You should create a clean environment in that case. imageio is not part of nnU-Net so it's not a mistake on our end

[mehnaz1985]

Thanks @FabianIsensee

[sten2lu]

Hi @mehnaz1985,

Since this issue has already been discussed and there has been no recent activity, we will close this issue in 2 weeks (Monday 14th of August). If your described issue happens to persist, please answer here so that we can solve it together.

Best, Carsten

[mehnaz1985]

Okay

Mehnaz Tabassum

On Mon, Jul 31, 2023 at 6:27 PM sten2lu @.***> wrote:

Hi @mehnaz1985 https://github.com/mehnaz1985,

Since this issue has already been discussed and there has been no recent activity, we will close this issue in 2 weeks (Monday 14th of August). If your described issue happens to persist, please answer here so that we can solve it together.

Best, Carsten

— Reply to this email directly, view it on GitHub https://github.com/MIC-DKFZ/nnUNet/issues/974#issuecomment-1657906842, or unsubscribe https://github.com/notifications/unsubscribe-auth/AP2WSD47V4A2QIJICDLTZBTXS5T6FANCNFSM5QSU753Q . You are receiving this because you were mentioned.Message ID: @.***>