Stefano de Pretis

icon indicating a website link https://scholar.google.it/citations?user=fy5RYKcAAAAJ&hl=it icon indicating an email [email protected]

icon location Milano icon location Bioinformatician dedicated to genomic studies

Results 1 comments of Stefano de Pretis

Failure to load cellular barcodes containing Ns

It seems like. The whitelist was generated by UMI-tools (version: 1.1.1), using the command: ` umi_tools whitelist --method=reads --extract-method=string --bc-pattern=CCCCCCCCCCCCCCCC -I ${SAMPLE}_R2.fastq.gz -S ${SAMPLE}_whitelist.tsv --plot-prefix=${SAMPLE} --set-cell-number=${n_cells} --subset-reads=10000000000 ` This is...