growthcurver

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Error in UseMethod("predict")

1

Hello, when running the code it is looping through my data to remove the blank and I get this error Error in UseMethod("predict") : no applicable method for 'predict' applied...

gabrielle3333

I'm really loving this package for looking at my growth curve data, but am wondering if it is possible to add axis titles and labels to the plots generated when...

emrowl1

Is there a way to calculate slope at the point of inflection?

ehofmeister

Hi Kathleen, first of all I want to thank you for the great work. My trouble is that I would like to plot a single curve fit but it returns...

GBSB12

Hi, I have notice that when using t_trim parameter with SummarizeGrowthByPlate() then is not able to fit any data on the growth curves. Even when you set t_trim to the...

mogusi8

Hi Kathleen, Thank you for this very useful code. I am trying to use it to calculate the doubling time of K. pneumoniae in a rich medium. Everything works fine...

GuilhemRoyer

Hi, I am trying to install as follows (RTools 4.0 present and installed). > devtools::install_github("sprouffske/growthcurver") Downloading GitHub repo sprouffske/growthcurver@master Error in utils::download.file(url, path, method = method, quiet = quiet, :...

thierryjanssens

Hi I found few wells have empirical AUC =0 with the note "cannot fit data" (an example below). Because the OD values are not the same, I expect a non-zero...

Edison2021

Keeping model fits when using SummarizeGrowthByPlate

2

Hi growthcurver team Just like to say how useful the package is. The one problem I have had using it is that it is hard to evaluate model fits when...

padpadpadpad

Cannot use t_trim with blank

1

Hi Kathleen, I've been trying to use your package to fit growthcurves. I have noticed a slight issue when trying to trim the growth data up to a specific timepoint...

benjamin-elusers