spietrzak

Empty Rows Error in runDiffusionMaps

2

I have been working through the tutorial for analyzing 10X data using SnapATAC, but I ran into an error on the runDiffusionMaps command, saying there were empty rows in the...

I am trying to run the makeBinary command on a snap object in SnapATAC using RStudio. When I try to run it, however, I see the following error: Error: vector...

I am starting to use SnapATAC to analyze some 10X Genomics scATAC-seq data and have been following along with the tutorial. However, I have encountered the following message when I...

'VelocytoLoom' object has no attribute 'colorandum'

4

I have recently generated a loom file using velocyto and I am currently trying to implement the analysis pipeline on it. However, I see the following error when I try...