spatel-gfb

SV Pipeline Jobs LongRunning : BAFFromGVCFs_ImportGVCFs and GenotypeVCFs

11

[GenomicsDB] As part of our pipeline, we are running the below mentioned command. What this step does is, reads the vcf files in batch of 50 so in total 4...

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Job Long Running -- Module : GatherBatchEvidence Job : BAFFromGVCFs_ImportGVCFs

4

Module : GatherBatchEvidence Job : BAFFromGVCFs_ImportGVCFs Issue: The job is taking almost 40 hours to complete for 156 (1000 genome) samples. The script and logs for the process are attached....