pytabix
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slowkow
:card_index: Retrieve data in genomic intervals with a Python interface for tabix.
It might be useful to note that the chromosome name scheme should match what is in the index file associated with the tabix file. Your documentation uses Ensembl's scheme ("1",...
tabix objects should have a close method so once can control the number of open files.
…en query fails fixes: #6
Include file name or URL in exception when index can't be opened will make debugging easier. Also have query errors include coordinate
Hi, pytabix is very useful, thanks for developing it. However I have one issue: Is there a way to access the header line of the input data file? I am...
I'm having some issues using PyTabix with the python `multiprocessing` module; it seems that it somehow results in memory corruption of some sort, and messages along the lines of ```...
Current syntax is: records = tb.querys("1:1000000-1250000") It would be great, if I could just get all variants on chromosome 1 by doing one of these: records = tb.querys("1") records =...
