Joe Slagel
Joe Slagel
Confirmed that this does indeed work with htsfile and samtools.
Sorry I must have missed the notice on this earlier on this. We're running trivy as part of our CI/CD and the security issues come up on a docker image...
Just encountered this ourselves.
sigh...varscan2 On Thu, Aug 2, 2018 at 11:39 AM Asha Rostamianfar wrote: > ah, thanks for the feedback! Is your case the same as VarScan2 or is it > from...
And to add -- the vcf files we are trying to load contain multiple variant callers merged using bcftools. On Thu, Aug 2, 2018 at 11:55 AM Joe Slagel wrote:...
While it may be a artifact of our VCF files, I observed records where the "RD" field also contained multiple values. Considering RD is suppose to be the depth of...
Now that I look through the issues, this question appears related to #104 and #110.
Yep that was the workaround I implemented. Thanks.
Might make it easier/simpler to submit jobs? E.g. one might be able to replace this: ``` dsub \ --provider google-cls-v2 \ --network projects/XXXXX/global/networks/XXXXX-shared \ --subnetwork projects/YYYYY/regions/us-west1/subnetworks/YYYYY-west1 \ --service-account [email protected] \...