Sean

System: Ubuntu 18.04.5 LTS Conda version: 4.11.0 I was able to install the roary 3.10.2 package, however when I then tried to update to the 3.12 package it seemed to...

I did figure out a work around that appears to be helping. First I tried the advice in this post https://github.com/tseemann/prokka/issues/598 by simply installing the missing module with the following...

Thanks you for getting back so fast @andersgs! I did not use conda to create the environment. I followed the directions for installing from github. I understand that the folder...

I found that adding `exit()` after usage like this ``` usage(); exit(); ``` didn't work I added this and it worked properly ``` usage(); exit(0); ```

Hi @joshualoving I don't know if you got it to work or not however I was having the same problem and I was able to get it to work. First...

Poretools works on the fast5 file not the fastq file. You would want.to run `poretools fasta barcode03/ > extract_fasta.fasta` if you are working with the fastq files you could use...

Hi Aaron and Nick, I figured out how to merge :+1: so that means that the master and the poretools_py3_dev branch are the same now. Some of the things I...

I too am having this problem using poretools 0.6.0