Justin Sing

Results 44 comments of Justin Sing

Did the singularity command above create the **pyprophet.sif** image without any errors? Do you see this: ``` $ singularity pull pyprophet.sif docker://pyprophet/pyprophet:2.1.3 INFO: Converting OCI blobs to SIF format INFO:...

Strange. I cannot reproduce the error you are getting. ``` development$ singularity exec -B /home/singjc/development/tmp/:/tmp/ pyprophet.sif pyprophet merge --template=/tmp/tmp.osw --out=/tmp/merged.osw /tmp/tmp.osw /tmp/tmp2.osw Info: Merged runs of file /tmp/tmp.osw to /tmp/merged.osw....

Closing this. If you're still facing issues, feel free to re-open.

Hi, Just wanted to add to this, I was also thinking it would be nice to have an html report file of some QC plots. I just recently wrote a...

@cbielow @timosachsenberg I was wondering if I should actually use the `MobilityPeak2D` instead of `MobilityPeak1D` and then appending to a `Mobilogram`. For more context, the main reason for updating the...

> For now, I think it is an improvement and should be merged if tests pass. Sorry I haven't been able to address all the comments/suggested changes, because I'm currently...

> @singjc Can you please test that this works as expected with UIS? (e.g. no data is missing from the .osw file)? I just got around to testing this, and...

Will close this, as the recent PR #142 covers this.

> Which branch is this on? It does not seem that I am getting a --profile option Should be available in the master branch: https://github.com/PyProphet/pyprophet/blob/master/pyprophet%2Fcli%2Fscore.py#L241

I think keeping track of the feature names, something similar to the draft PR #117, would probably be able to make this automatic. Need to check if the issue is...