Evan Staton

Thanks for the update. Can you tell me which OS version and Perl version you are using? perl -v and cat /etc/redhat-release

Hi, I've been looking at how to recreate this issue but this is not a common Linux variant, and so it is not available from any common cloud providers. Let's...

Hi Diego, I understand the confusion because I have seen the same issue. You are correct, there should be non-LTR elements reported for common plant genomes. The non-LTR finding method...

Sorry, I missed this part of the question. "Families" here are multi-copy groups (2336 in this report) and "singletons" (2696 in this report) are elements not grouped with any family....

Thank you for the clarification, I misunderstood to real issue. Indeed, this is a bug. I did some testing yesterday and I can recreate this issue in some cases. I...

Thank you for the patience. I have made a new release today (v0.12.3) that should address all the issues about the family/element numbers (new features have also been added but...

I believe all of the issues described above have been resolved in v0.12.4 (specifically, the issue with the non-LTRs). Please let me know if there are any more questions or...

It looks like you are missing the standard C library (glibc). Instead of working on the core libraries, which may be a challenge on Mac, can you try the Docker...

Hi, There is a Docker image on Docker Hub that I have built from the latest version. If you have Docker installed on your Mac (there is an installer on...

Hi, did you try the command above? You should be able to run the whole system and identify the elements you want without installing anything other than Docker. If you...