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<WIP> Comparitive benchmarks notebook

Open rahulbshrestha opened this issue 2 years ago • 3 comments

This PR adds a Jupyter notebook for benchmarking IO time, IO memory, on-disk size and in-memory size for objects in Anndata, Loom and Seurat.

Related issue: https://github.com/scverse/anndata/issues/781

rahulbshrestha avatar Jun 15 '22 08:06 rahulbshrestha

Codecov Report

Merging #785 (a23913f) into master (bc9f886) will decrease coverage by 0.01%. The diff coverage is n/a.

Additional details and impacted files
@@            Coverage Diff             @@
##           master     #785      +/-   ##
==========================================
- Coverage   83.74%   83.73%   -0.02%     
==========================================
  Files          32       31       -1     
  Lines        4399     4396       -3     
==========================================
- Hits         3684     3681       -3     
  Misses        715      715              
Impacted Files Coverage Δ
anndata/readwrite.py

codecov[bot] avatar Jun 15 '22 09:06 codecov[bot]

Could you add the notebook to the rendered docs, similar to how it's done here?

ivirshup avatar Jun 22 '22 12:06 ivirshup

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