anndata
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"AnnData.concatenate" discards parts of the .raw attribute
In reference to #263
I am facing a similar issue now. I am concatenating two identical anndatas (as a test). They have the same var dataframe under adata.raw.var
and adata2.raw.var
. However, adata3
, which is the results of adata3 = adata.concatenate(adata2, join="outer")
has a dataframe in adata3.raw.var
that is missing the columns (only the index is there). Is this expected?