Sébastien Besson

Hi @jacobpennels assuming you are using the [bioformats.ImageReader.read()](http://pythonhosted.org/python-bioformats/index.html#bioformats.ImageReader.read) API in your code, you should be able to pass a region using the `XYWH` key/value. This call effectively delegates to the...

Discussed earlier today with @dgault and @melissalinkert, the current proposal offers a good compromise allowing to run the non-regression repository tests on JDK 21 without dropping support for JDK 8...

On the principle, I agree the upgrade checker could handle the cases where `FormatTools.VERSION` is set to its fallback value and return early for instance. Trying to understand the context,...

Hi @olatarkowska, I failed to reproduce the exception using the following command: ``` bfconvert /tmp/source.tif /tmp/test/prefix_X%xY%y_Z%z_T%t_C%c.ome.tiff -tilex 128 -tiley 128 -option ometiff.companion prefix.companion.ome ``` and `/tmp/source.tif` being either a single...

Thanks for the write-up and the initial version of the proposal @normanrz. From an external perspective, this looks fairly minimal and self-contained although I assumed the bulk of the issue...

From my side, there is definitely an argument for consolidating some metadata at the top-level especially for complex structures like plates. This echoes what was done for the `wells` field...

Trying to look into where these conventions might have been documented (or not), I realized that the webgateway render API also uses 0-based indexing e.g. the following calls work https://idr.openmicroscopy.org/webgateway/render_image/12922202/0/0/...

+1 for adding support for newer versions of Texlive on precise as well

HI @aoles @jkh1, we are currently working to restore the binary downloads. However, several aspects are still outside our control and we will update https://forum.image.sc/t/ome-resources-down-due-to-uod-outage/43957 accordingly. Looking briefly at `RBioFormats`,...

We are definitely hoping to get the downloads up as soon as possible. In case you are considering switching immediately or in a near-future, the canonical URL for the versioned...