Sue Bello

I've created an MP ticket to address these terms in the MP https://github.com/obophenotype/mammalian-phenotype-ontology/issues/3164

That would be great @matentzn That was part of the reason I made it a Google sheet that anyone can edit.

We've discussed some of these at MGI and we're good with using terms from the cellular phenotype and homeostasis/metabolism phenotype branches. I think we will need to make new terms...

@nicolevasilevsky How else was I going to crib off your notes :) Seriously though coordinating the MP and HP terms only makes sense.

Poking around the MP I find some exceptions to this pattern: 'unresponsive to X stimuli' (MP:0001491, MP:0013922) 'anhedonia' (MP:0009710) These terms when they have definitions use the EQ pattern above...

Example from the MP mappings tab - hydronephrosis - in mp eq is has part some (dilated and (inheres in some renal pelvis) and (has modifier some abnormal)) But in...

Another example from MP mappings, HPO:0008873 shares an eq with MP:0000547 but the HPO eq is missing that the HPO term is short limbs with an average size trunk.

Since @chris-grove asked about a detached pattern I went looking in the MP and I think we need to add this to the complex list. Example term: detached Reissner membrane...

The MP has the term true hermaphroditism but the EQ uses the PATO term hermaphrodite has part some ( PATO_0001340 and inheres in some UBERON_0000468 and RO_0002573 some PATO_0000460) I...

Links to how the MP does it http://purl.obolibrary.org/obo/MP_0000001 the VT does it (not phenotype but useful to look at how we changed the MP structure to cover all vertebrates) http://purl.obolibrary.org/obo/VT_0000001