Sue Bello

@cmungall Why do you believe hypoxia and oxidative stress are not phenotypes? Both terms exist in the MP and Peter and I had some back and forth earlier in the...

Thanks @pnrobinson I've created a ticket for the MP to review the annotations to this term. Part of the issue is that in annotating we are often dealing with conclusions...

@pnrobinson We have both hypoxia and hypoxemia terms. I've created an MP ticket to review these as well. But here we have more direct tissue and cell measures of hypoxia....

@Achchuthan for that annotation I would not want to use the MP meaning of hypoxia or oxidative stress which are referring to the phenotype in the organism. Instead I would...

@mah11 Do we have a Upheno pattern for both flavors? The decreased quality of a biological process was the only one I found. Did I miss the other or do...

In this case I think I prefer the NBO term. The MP also makes use of child terms of the NBO term like limb coordination and gait. I'm not comfortable...

We use broken for a number of non-bone terms. For example: ocular rupture (MP:0006225) uterus rupture (MP:0003571) ruptured lens capsule (MP:0008841) I don't think I would want to use fractured...

ruptured is currently a synonym for broken in PATO

Example of an MP term using this pattern 'absent digestive secretion' (MP:0000507) EQ is: 'has part' some (absent and ('inheres in' some (secretion and ('occurs in' some 'digestive system'))) and...

grouping class: abnormal X morphology (characteristic of part of) entire entity: abnormal entire X morphology (characteristic of) or possibly abnormal total X morphology e.g abnormal total adipose tissue morphology or...