sbabyanusha

Cancer studies updated in this pull request: - ihch_dkfz_2019. # checks For all pull requests: - [ ] Passes validation For a new study (in addition to above): - [...

Cancer studies updated in this pull request: - acc_tcga_pan_can_atlas_2018 - blca_tcga_pan_can_atlas_2018 - brca_tcga_pan_can_atlas_2018 - cesc_tcga_pan_can_atlas_2018 - chol_tcga_pan_can_atlas_2018 - coadread_tcga_pan_can_atlas_2018

https://doi.org/10.1016/j.ccell.2023.03.007 Data Source : https://ccma.shinyapps.io/ccma/ - [x] [create an issue on datahub](https://github.com/cBioPortal/datahub/issues/new) before curating a study (one issue per study) and copy this checklist to the issue tracker - [x]...

Cancer studies updated in this pull request: - ucec_ccr_cfdna_msk_2022 - pan_origimed_2020

Fix #1895 All the variants that are marked as MUTATED in the HGVSP_Short column are fixed. Cancer studies updated in this pull request: 1. acc_tcga_pan_can_atlas_2018 2. angs_painter_2020 3. bcc_unige_2016 4....

PR : https://github.com/cBioPortal/datahub/pull/1831 **nbl_msk_2023:** - Treatment timeline data for this study is available. [Fig6](https://www.nature.com/articles/s41588-023-01395-x/figures/6) and https://papaemmelab.github.io/neuroblastoma-clonality-viewer/. (Need to request Author) **bladder_mskcc_2022:** - Normalized expression data is available at https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE103990. **coad_silu_2022:**...

The issue is when annotating some of the long allele deletions the rows having "transcript_ablation" as a consequence and "splice region" as their variant class is returning empty MAF as...

Cancer studies updated in this pull request: - pancan_mappyacts_2022 (https://triage.cbioportal.mskcc.org/study/summary?id=pancan_mappyacts_2022) # checks For all pull requests: - [ ] Passes validation Here are a few notes: 1. Is this study...