Satrajit Ghosh

Results 251 comments of Satrajit Ghosh

no - i tackled the pieces necessary to create this table. we are working on a nidmification of the outputs from freesurfer and ants. once that's ready i'll add that...

@cni-md - it may be worth instrumenting this function to debug: https://github.com/nipy/nipype/blob/master/nipype/algorithms/modelgen.py#L170 it looks like the conditions are matched by equality, which shouldn't be true for partial matches. do you...

@miykael - as of spm5, spm supports nifti img/hdr pair and 4-D nifti images and we do not support spm2. so i would be ok with conversion to img/hdr pairs...

@sulantha2006 - there is an execution config option (`job_finished_timeout`) that you can increase checking results files and other things. https://miykael.github.io/nipype_tutorial/notebooks/basic_execution_configuration.html#Execution

any distributed plugin if i remember correctly, but may have been created specifically for slurm/pbs/etc. however, i would not expect an issue with fuse necessarily on a single system (since...

@sulantha2006 - thank you for the details. in this case it is then interesting that the failure happens - i would not have expected this given how things work. also...

instead of adding we could subtract, but this will depend on the field of view of the data. if that is tight one could run into issues. i think we...

just some fyi: `run` and `echo` have indices but no base is specified. most datasets i have seen use 1+. there is mention of slice index 0 in a piece...

perhaps the contributor section of this dandi schema may give some inspiration or pause in adding one role at a time. here is an example: https://api.dandiarchive.org/api/dandisets/000026/versions/draft/ - also note that...

in general, this is true not just of age but any column appearing in the phenotype directory as well that replicates elsewhere. age and sex and other demographics are often...