saras224

Results 31 comments of saras224

Thanks @donovan-parks ! But when I am trying to install through bioconda it is not installing the latest version it is installing the old version. How do I upgrade to...

Hi @donovan-parks! I successfully upgraded to the latest version of gtdbtk and I ran the classify_wf command, everything was going fine but I think while assigning the ANI values an...

Hi @allind That issue got resolved as I tried to run the same command inside the directory where I had built the database. I was able to run the analysis...

Hi @allind Please help me in calculating the relative abundance of the species detected by eukdetect. Thanks Saraswati

![fungus_plot](https://user-images.githubusercontent.com/77498189/158773270-9e9a566f-ef3a-469a-bb44-6acba79fec49.jpg) I want to make plot which looks something like this. compare different species in different samples. Also different samples have different read lengths, so can you make changes in...

Hi @allind 1. Can I use the read counts directly as the abundance because I have the same number of reads in all the samples so even if I divide...

hi @boasvdp is it possible to include the product description also in the summary file..is it possible to modify the script for a summary? if yes how? I want to...

Hi @jdwinkler-lanzatech I am trying to annotate MAGs suing EggNOG, can u tell me the command that you used for annotation? It was quite confusing on the wiki page. Thanks...

Thanks for the prompt response!!! @jdwinkler-lanzatech :) :)

> Hi, faced this Bioperl version issue a few months back. solved it by modifying a few lines of code. > > Here's how I solved it on **v1.14.5**. Pretty...