Stefan Appelhoff

Results 644 comments of Stefan Appelhoff

I would also suggest comparing against pyprep's: [`pyprep.NoisyChannels(raw).find_all_bads()`](https://pyprep.readthedocs.io/en/latest/generated/pyprep.NoisyChannels.html#pyprep.NoisyChannels)

> I have to say that find_all_Bads marks way too many channels as bad in my datasets. I usually only use a subset of the functions in pyprep (I can...

> ❌ One invalid file phenotype/practicelogbook.json is not registered in .bidsignore @TheChymera what makes you think that `practicelogbook.json` is an invalid file? See the file template in this BIDS spec...

mh then we have two ways of specifying relative paths in the spec, should we clarify that?

> apparently this shows that the new format of URI is not supported for mircroscopy by the current version of the validator: should I open an issue on the validator...

It's under Common Principles: > All imaging data MUST be stored using the NIfTI file format. https://bids-specification.readthedocs.io/en/latest/common-principles.html#imaging-files where exactly would you have expected this information to be instead? > Will...

> I guess MRI was written first, when imaging data meant MRI only. That is true. I think we should adjust this, thanks for bringing it up.

Hi @PeerHerholz, thanks for the patience -- I am not sure I'm the correct person to judge this, but to obtain a number you may open a PR to the...

We also have a discord channel --> **link removed** But I am not sure it was ever be meant to be official, or only for a specific event. Do you...

I think for subject specific stimuli that don't fit into the `_stim.[tsv.gz|json]` I would organize my `/stimuli` directory in a suitable way, and use the `stim_file` column from `events.tsv` to...