pysradb

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**Describe the bug** For this request ``` pysradb search --db sra --query 'NextSeq 500 stress' --source 'transcriptomic' --organism 'Arabidopsis thaliana' --platform 'illumina' --selection 'random' --strategy 'rna seq' --max 20 --verbosity...

bernt-matthias

[ENH] Pysradb doesn't work on "superseries"

1

If I run "pysradb gsm-to-srp GSE163666", I get no results. But if I run on one of the subseries, GSE165894, it works perfectly. Is there anyway to "traverse" the GEO...

gdolsten

Stats not saved in output file

3

Hello! I am having some issues saving the stats generated after a search. **To Reproduce:** In Nextflow process pysradb search -q ${sra_query} -s -g --saveto ${sra_query_out_file}.sra In my output file...

trinidadmartin

**Describe the bug** A command lacking the `--publication-date` argument like ``` pysradb search --db sra --query 'cancer' --source 'transcriptomic' --organism 'Homo sapiens' --platform 'illumina' --max 100 --verbosity 2 --stats --graphs...

bernt-matthias