sajjadasaf

I have run LoReAn on docker but it shows the following error when processing the long reads. I used the following code docker run -it --rm -v /home/sajjad/Augustus/config:/opt/LoReAn/third_party/software/augustus/config/ -v $HOME:/home/lorean...

I have run LOREAN with examples without any issue but when i used my own plant genome sequences it shows the following errores. pleas help. i am using docker version...

cafetutorial_draw_tree.py ERROR

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Hello Cafe users, I need your help as i am new to cafe. I have run cafe5 and completed successfully. Now i want to show gene family expansion and contraction...

I am facing the following error. Need your guidance sajjad@sajjad-ThinkStation-P910:~/Downloads$ croissance --figures hhh.tsv 2022-11-28 09:39:48 croissance INFO Reading curves from 'hhh.tsv 2022-11-28 09:39:48 croissance INFO Collected a total of 8...

NOTE: Process `HYBRID:strategy_2_pilon (aspergillus_terreus:strategy_2)` terminated with an error exit status (137) -- Execution is retried (1)

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```console (base) omic@omic-Precision-7920-Tower:~/funig8$ nextflow run fmalmeida/mpgap --output _ASSEMBLY --max_cpus 5 --skip_spades --input "samplesheet.yml" --unicycler_additional_parameters ' --mode conservative ' -profile docker curl: (28) SSL connection timeout N E X T F...