Rodrigo Vargas Honorato

icon indicating a website link rvhonorato.me icon indicating an email [email protected]

icon company @UtrechtUniversity icon location Utrecht, Netherlands icon location Research Software Engineer with a PhD in Bioinformatics working with Structural Computational Biology, web technologies and everything in between

Results 23 issues of Rodrigo Vargas Honorato

`validate_parameters_are_not_incompatible` ignoring incompatible value

## **Module/Workflow/Library affected** `gear.prepare_run` ## **Expected behavior** When reading the incompatible parameter, it should check what is the value that raises the incompatibility ## **Actual behavior** It does not check...

bug
execution

Refactor `XYZWriter` to not produce intermediate files

You are about to submit a new Pull Request. Before continuing make sure you read the [contributing guidelines](CONTRIBUTING.md) and that you comply with the following criteria: - [ ] You...

Remove benchmark CLI

## **Desired feature/enhancement** Remove all CLIs related to benchmarking ## **Motivation** The current implementation at `src/haddock/clis/cli_bm.py` is dead code. ## **Description** This feature has been superseeded by a full application...

enhancement