Robert A. Petit III
Robert A. Petit III
## PR checklist Closes https://github.com/nf-core/modules/issues/905 - [x] This comment contains a description of changes (with reason). - [x] If you've fixed a bug or added code that should be tested,...
I'm running sepp, through busco and am currently experiencing the following with the included pplacer: ``` pplacer Segmentation fault ``` If I install the latest version of pplacer from bioconda,...
This PR adds EToKi, a toolkit used by Enterobase ---- Please read the [guidelines for Bioconda recipes](https://bioconda.github.io/contributor/guidelines.html) before opening a pull request (PR). * If this PR adds or updates...
Bactopia is continuously being updated and there are still many things on the roadmap. To be more transparent, I'll document what's planned and what needs to be done. Feel free...
**Description** A description of the bug you are experiencing. **Steps to Reproduce** Steps to reproduce the behavior: ``` bactopia ... bactopia tools ... !!ERROR!! ``` **Expected Behavior** A description of...
## PR checklist Closes https://github.com/nf-core/modules/issues/2233 - [x] This comment contains a description of changes (with reason). - [x] If you've fixed a bug or added code that should be tested,...
Related to https://github.com/nf-core/modules/issues/2154 Manually inspected the following using `TMPDIR=~ nf-core modules test` for Docker, Singularity and Conda. - [x] amrfinderplus/run - [x] amrfinderplus/update - [x] ariba/run - [x] busco -...
### Is there an existing module for this? - [X] I have searched for the existing module ### Is there an open PR for this? - [X] I have searched...
Hello! Currently when running `phyloFlash_makedb.pl` it is built in [current directory](https://github.com/HRGV/phyloFlash/blob/master/phyloFlash_makedb.pl#L279). I think it would be useful to allow users to specify this on the command line similar to how...
Yo! Here is a PR to convert the Travis Ci tests to Github Actions PLease squash and merge!