Ryan Lorig-Roach

That unfortunately requires you to rerun the layout step, and in a situation where you are navigating to many positions, possibly at different zoom levels, rescaling the text would be...

For an example of a library that uses vg's bidirected sequence graph (bdsg) library, and also maintains overlap data, you could check out https://github.com/vgteam/GetBlunted bdsg has PackedGraph and HashGraph implementations.

Just adding my vote: Considering that you need to do some significant logistics to make this work, I would also love to have a fully integrated mapper that works for...

Where it fails is particularly in longer mappings/alignments. Sometimes it will just never finish running. The case where long mappings is useful is if you want to map a nanopore...

Hi, I am also interested in Partial Order Alignment, or just progressive sequence to graph alignment. For the current version of Seqan3, is the path information stored for each sequence...

Hi, This may not be ideal for everyone, but this solution is working for me using CMake ExternalProject: ```cmake # Need to explicitly enable ExternalProject functionality include(ExternalProject) # Download or...

This is nice, thanks. I've never seen this recommended in all my googling.

Unfortunately for other projects (spoa) FetchContent it doesn't seem to work. Tells me `spoa::spoa` target is not found

@marehr I see. What is happening is that my system installation of spoa (required for other software) was being located first, and it seems that FetchContent has a mechanism that...

Yes that's exactly right. To make this debugging simpler, I created a mock project that looks like this: ``` ###################################### # ---------------------------------- # # -------- COMPILER VERSION -------- # #...