rickbeeloo
rickbeeloo
**Description** When we take a simple sentence like `fermented leaves and fruit` CoreNLP misses the dependency between `fermented` and `fruit`. Detecting this is crucial for our application and therefore we...
Let's take the following setence: `organic wastes under variable temperature conditions` and pattern: `[{tag:/JJ/}]*[{tag:/NN.*/}]+` When we pass this to http://corenlp.run/:  Then when we do this in Python: ``` with...
When I read the `Start` column which is `int64` when I check it in Pandas it somehow appears to be `int23` after passing it to `PyRanges`, which I suppose is...
Let's take this example: id | start | end -- | -- | -- 1 | 5 | 10 Then we find a new overlap falling within here id |...
I just took a look at the GFA output and noticed that, unlike tools such as seqwish, Bifrost does not output the paths corresponding to each node. Is it possible...
Hey! First of all, cool packages!, I really did not want to go through the hassle of defining all iterator syntax... and this seems the prefect solution for that hehe...
First of all, really cool! We have several questions about Mosaic for our use: - Does it matter if there are duplicate S->T edges in the input file? - How...
First of all, cool tool! We're trying it to run for a large collection of genomes and first built the k-mer database using: `kmc -k31 -m450 -fm -t30 -ci0 @paths.txt...
Hey @iminkin! I'm trying to run this on another dataset however I keep getting the "[the input is corrupted](https://github.com/medvedevgroup/TwoPaCo/blob/2c46b3073b89124063c7619b3587482ef945b5f8/src/graphdump/graphdump.cpp#L471)" error. I tried to take a look at the source code...
We just run `twopaco` for thousands of bacterial genomes and now it's at: ``` Round 0, 0:4398046511104 Pass Filling Filtering ``` However, when we look at `top` we see that...