Ray Stefancsik
Ray Stefancsik
Need to discuss and make a plan. 1. [ ] How to pull the entities referenced by imported composite OBA terms into EFO? Zoe to discuss desirability of this with...
If applied, this commit will fix #904.
* Obtain additional examples of [HP vs MP special cases #42](https://github.com/obophenotype/upheno-dev/issues/42) where the uPheno2 semantic similarity score is lower than the uPheno1 score. * Discuss these examples at the Phenotype...
Some MP terms already have Equivalent Class axioms, while the exactly matching HPO term does not have any. The same is true for some HPO-MP matching term pairs. - [x]...
- [ ] Request a term for `voluntary control of defecation` from GO - as subclass of [voluntary musculoskeletal movement](https://www.ebi.ac.uk/ols/ontologies/go/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FGO_0050882). If GO not happy to add, then add to NBO....
Please, add a tutorial on Manchester Syntax.
1. The purpose of pattern template `compound_attributes` is to extend PATO with compound qualities, i.e. qualities that are defined by using primitive (I mean existing PATO) qualities. The two-component quality...
This issue is part of the work that is needed to fix https://github.com/obophenotype/upheno/issues/928 . ### Add the following classes to OBA: object_id | object_label | entity | entity_label | quality...
Edit the following [high level hierarchy classes](https://www.ebi.ac.uk/ols4/ontologies/oba/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FOBA_0000001?lang=en) in to biologically meaningful groups: - [ ] OBA:2020000 age of onset of disease - [ ] OBA:0003870 aging onset quality - [...